Online content
- Slideshare presentations – combines material from work at the Vrije Universiteit Brussel and while at Pathomation
- RealData blog – a blog on digital pathology and best software practices (including QA and DevOps)
Video content
- Digital pathology and its importance as an omics data layers (from CPW 2018)
- A global integrative ecosystem for digital pathology: how can we get there? (UPMC CompPath lecture series)
- Whole Slide Imaging: beyond pathology (UPMC CompPath lecture series)
- Keynote address (from CPW 2016)
Peer-reviewed scientific papers
Evaluation of an online training tool for scoring programmed cell death ligand-1 (PD-L1) diagnostic tests for lung cancer.
Jasani B, Bänfer G, Fish R, Waelput W, Sucaet Y, Barker C, Whiteley JL, Walker J, Hovelinck R, Diezko R. Diagn Pathol.
2020 Apr 17;15(1):37. doi: 10.1186/s13000-020-00953-9.
International consensus guidelines for scoring the histopathological growth patterns of liver metastasis.
van Dam PJ, van der Stok EP, Teuwen LA, Van den Eynden GG, Illemann M, Frentzas S, Majeed AW, Eefsen RL, Coebergh van den Braak RRJ, Lazaris A, Fernandez MC, Galjart B, Laerum OD, Rayes R, Grünhagen DJ, Van de Paer M, Sucaet Y, Mudhar HS, Schvimer M, Nyström H, Kockx M, Bird NC, Vidal-Vanaclocha F, Metrakos P, Simoneau E, Verhoef C, Dirix LY, Van Laere S, Gao ZH, Brodt P, Reynolds AR, Vermeulen PB.
Br J Cancer. 2017 Nov 7;117(10):1427-1441. doi: 10.1038/bjc.2017.334. Epub 2017 Oct 5.
Evolution and applications of plant pathway resources and databases.
Sucaet Y, Deva T.
Brief Bioinform. 2011 Sep;12(5):530-44. doi: 10.1093/bib/bbq083. Epub 2011 Jan 27.
PlantMetabolomics.org: a web portal for plant metabolomics experiments.
Bais P, Moon SM, He K, Leitao R, Dreher K, Walk T, Sucaet Y, Barkan L, Wohlgemuth G, Roth MR, Wurtele ES, Dixon P, Fiehn O, Lange BM, Shulaev V, Sumner LW, Welti R, Nikolau BJ, Rhee SY, Dickerson JA.
Plant Physiol. 2010 Apr;152(4):1807-16. doi: 10.1104/pp.109.151027. Epub 2010 Feb 10.
MetNetAPI: A flexible method to access and manipulate biological network data from MetNet.
Sucaet Y, Wurtele ES.
BMC Res Notes. 2010 Nov 18;3:312. doi: 10.1186/1756-0500-3-312.
MetNet Online: a novel integrated resource for plant systems biology.
Sucaet Y, Wang Y, Li J, Wurtele ES.
BMC Bioinformatics. 2012 Oct 15;13:267. doi: 10.1186/1471-2105-13-267.
A web-based relational database for monitoring and analyzing mosquito population dynamics.
Sucaet Y, Van Hemert J, Tucker B, Bartholomay L.
J Med Entomol. 2008 Jul;45(4):775-84. doi: 10.1603/0022-2585(2008)45[775:AWRDFM]2.0.CO;2.
Other publications (trade journals, professional, trade journals...)
Implementing digital pathology for biobanking, Sucaet Y
Biobanken gaan digitaal aan de Vrije Universiteit Brussel, Sucaet Y
Dag microscoop, hallo beeldscherm, Duker J, Sucaet Y